AI Research

    DELBERT-2: Pretrained Fingerprint Language Models for DEL Protein Binder Prediction

    A ModernBERT encoder learns molecular fingerprint sequences from 2.5 million DEL compounds

    We present DELBERT-2, a pretrained fingerprint language model that converts sparse molecular fingerprints into unified token sequences using a ModernBERT encoder trained with masked language modelling on 2.5M molecules from the AIRCHECK DEL corpus.

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    ArXiv CS.LG

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    ArXiv CS.LG
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    Generated insight by OnAirToday AI

    This approach applies language-model pretraining to sparse molecular fingerprints, offering a way to learn shared representations from a large compound collection. Its relevance to DEL protein binder prediction depends on how well those representations support that task.

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